Implements Alembic for managing token storage database schema versions.
Migrations run automatically on startup with full backward compatibility.
**Changes:**
- Add Alembic dependency (1.14.0+) and SQLAlchemy (auto-installed)
- Create migration infrastructure in alembic/ directory
- Add initial migration (001) capturing current schema
- Modify RefreshTokenStorage.initialize() to run migrations via anyio
- Add CLI commands: db upgrade, current, history, downgrade, migrate
- Add comprehensive migration documentation
**Backward Compatibility:**
- Pre-Alembic databases automatically stamped with revision 001
- No schema changes for existing databases
- Automatic upgrade on first startup after update
**Migration Strategy:**
Three scenarios handled:
1. New database → Run migrations from scratch
2. Pre-Alembic database → Stamp with 001 (no changes)
3. Alembic-managed → Upgrade to latest
**Architecture:**
- Uses anyio.to_thread.run_sync() for structured concurrency
- Alembic env.py runs with anyio.run() in worker thread
- SQLite-friendly migration patterns documented
- No ThreadPoolExecutor needed (anyio handles it)
**CLI Usage:**
```bash
nextcloud-mcp-server db upgrade # Upgrade to latest
nextcloud-mcp-server db current # Show version
nextcloud-mcp-server db history # View changelog
nextcloud-mcp-server db downgrade # Rollback (with confirmation)
nextcloud-mcp-server db migrate "description" # Create migration
```
**Testing:**
- All 13 webhook storage tests pass
- New/pre-Alembic database scenarios validated
- anyio integration tested
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
- Move scanner/processor tasks from FastMCP session lifespan to Starlette
server lifespan (correct architecture: background tasks run once at
server level, not per-session)
- Change default CLI transport from SSE to streamable-http
- Remove SSE transport option from CLI (SSE is deprecated)
- Remove SSE client session factory from test fixtures
- Add tracing instrumentation to BM25 hybrid search operations for
better observability
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
Chris Coutinho