feat: add Alembic database migration system
Implements Alembic for managing token storage database schema versions. Migrations run automatically on startup with full backward compatibility. **Changes:** - Add Alembic dependency (1.14.0+) and SQLAlchemy (auto-installed) - Create migration infrastructure in alembic/ directory - Add initial migration (001) capturing current schema - Modify RefreshTokenStorage.initialize() to run migrations via anyio - Add CLI commands: db upgrade, current, history, downgrade, migrate - Add comprehensive migration documentation **Backward Compatibility:** - Pre-Alembic databases automatically stamped with revision 001 - No schema changes for existing databases - Automatic upgrade on first startup after update **Migration Strategy:** Three scenarios handled: 1. New database → Run migrations from scratch 2. Pre-Alembic database → Stamp with 001 (no changes) 3. Alembic-managed → Upgrade to latest **Architecture:** - Uses anyio.to_thread.run_sync() for structured concurrency - Alembic env.py runs with anyio.run() in worker thread - SQLite-friendly migration patterns documented - No ThreadPoolExecutor needed (anyio handles it) **CLI Usage:** ```bash nextcloud-mcp-server db upgrade # Upgrade to latest nextcloud-mcp-server db current # Show version nextcloud-mcp-server db history # View changelog nextcloud-mcp-server db downgrade # Rollback (with confirmation) nextcloud-mcp-server db migrate "description" # Create migration ``` **Testing:** - All 13 webhook storage tests pass - New/pre-Alembic database scenarios validated - anyio integration tested 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
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@@ -253,5 +253,195 @@ def run(
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)
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@click.group()
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def db():
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"""Database migration management commands."""
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pass
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@db.command()
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@click.option(
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"--database-path",
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"-d",
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envvar="TOKEN_STORAGE_DB",
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default="/app/data/tokens.db",
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show_default=True,
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help="Path to token storage database (can also use TOKEN_STORAGE_DB env var)",
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)
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@click.option(
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"--revision",
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"-r",
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default="head",
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show_default=True,
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help="Target revision (default: head for latest)",
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)
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def upgrade(database_path: str, revision: str):
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"""Upgrade database to a specific revision.
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\b
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Examples:
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# Upgrade to latest version
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$ nextcloud-mcp-server db upgrade
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# Upgrade to specific revision
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$ nextcloud-mcp-server db upgrade --revision 001
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# Use custom database path
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$ nextcloud-mcp-server db upgrade -d /path/to/tokens.db
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"""
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from nextcloud_mcp_server.migrations import upgrade_database
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try:
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click.echo(f"Upgrading database to revision: {revision}")
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upgrade_database(database_path, revision)
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click.echo(click.style("✓ Database upgraded successfully", fg="green"))
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except Exception as e:
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click.echo(click.style(f"✗ Upgrade failed: {e}", fg="red"), err=True)
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raise click.ClickException(str(e))
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@db.command()
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@click.option(
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"--database-path",
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"-d",
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envvar="TOKEN_STORAGE_DB",
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default="/app/data/tokens.db",
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show_default=True,
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help="Path to token storage database",
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)
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@click.option(
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"--revision",
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"-r",
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default="-1",
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show_default=True,
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help="Target revision (default: -1 for previous version)",
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)
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@click.confirmation_option(
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prompt="Are you sure you want to downgrade the database? This may result in data loss."
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)
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def downgrade(database_path: str, revision: str):
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"""Downgrade database to a specific revision.
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WARNING: This may result in data loss! Use with caution.
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\b
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Examples:
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# Downgrade by one version
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$ nextcloud-mcp-server db downgrade
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# Downgrade to specific revision
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$ nextcloud-mcp-server db downgrade --revision 001
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# Downgrade to base (empty database)
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$ nextcloud-mcp-server db downgrade --revision base
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"""
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from nextcloud_mcp_server.migrations import downgrade_database
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try:
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click.echo(f"Downgrading database to revision: {revision}")
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downgrade_database(database_path, revision)
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click.echo(click.style("✓ Database downgraded successfully", fg="green"))
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except Exception as e:
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click.echo(click.style(f"✗ Downgrade failed: {e}", fg="red"), err=True)
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raise click.ClickException(str(e))
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@db.command()
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@click.option(
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"--database-path",
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"-d",
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envvar="TOKEN_STORAGE_DB",
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default="/app/data/tokens.db",
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show_default=True,
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help="Path to token storage database",
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)
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def current(database_path: str):
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"""Show current database revision.
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\b
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Example:
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$ nextcloud-mcp-server db current
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"""
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from nextcloud_mcp_server.migrations import get_current_revision
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try:
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revision = get_current_revision(database_path)
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if revision:
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click.echo(f"Current revision: {click.style(revision, fg='cyan')}")
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else:
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click.echo(
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click.style(
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"Database is not versioned (no alembic_version table)", fg="yellow"
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)
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)
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except Exception as e:
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click.echo(
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click.style(f"✗ Failed to get current revision: {e}", fg="red"), err=True
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)
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raise click.ClickException(str(e))
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@db.command()
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@click.option(
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"--database-path",
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"-d",
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envvar="TOKEN_STORAGE_DB",
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default="/app/data/tokens.db",
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show_default=True,
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help="Path to token storage database",
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)
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def history(database_path: str):
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"""Show migration history.
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\b
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Example:
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$ nextcloud-mcp-server db history
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"""
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from nextcloud_mcp_server.migrations import show_migration_history
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try:
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click.echo("Migration history:")
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show_migration_history(database_path)
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except Exception as e:
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click.echo(click.style(f"✗ Failed to show history: {e}", fg="red"), err=True)
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raise click.ClickException(str(e))
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@db.command()
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@click.argument("message")
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def migrate(message: str):
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"""Create a new migration script (developers only).
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The MESSAGE argument describes the changes in this migration.
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\b
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Examples:
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$ nextcloud-mcp-server db migrate "add user preferences table"
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$ nextcloud-mcp-server db migrate "add index on refresh_tokens.user_id"
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Note: You must manually edit the generated migration file to add SQL statements.
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"""
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from nextcloud_mcp_server.migrations import create_migration
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try:
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click.echo(f"Creating new migration: {message}")
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create_migration(message)
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click.echo(click.style("✓ Migration created successfully", fg="green"))
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click.echo(
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"Edit the migration file in alembic/versions/ to add upgrade/downgrade SQL."
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)
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except Exception as e:
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click.echo(
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click.style(f"✗ Failed to create migration: {e}", fg="red"), err=True
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)
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raise click.ClickException(str(e))
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# Create CLI group with subcommands
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cli = click.Group()
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cli.add_command(run)
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cli.add_command(db)
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if __name__ == "__main__":
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run()
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cli()
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